; When using this new tolopolgy, make sure you have included the required parameters ; (see http://swisssidechain.ch/MD/gromacs.html) [ GME ] ; 5-o-methyl-glutamic acid [ atoms ] N NH1 -0.4700 0 HN H 0.3100 1 CA CT1 0.0700 2 HA HB 0.0900 3 CB CT2 -0.1800 4 HB1 HA 0.0900 5 HB2 HA 0.0900 6 CG CT2 -0.1200 7 HG1 HA 0.0900 8 HG2 HA 0.0900 9 CD CC 0.6600 10 OE2 OCC -0.4300 11 OE1 O -0.5700 12 CZ CT3 0.0100 13 HZ2 HA 0.0900 14 HZ1 HA 0.0900 15 HZ3 HA 0.0900 16 C C 0.5100 17 O O -0.5100 18 [ bonds ] N HN N CA C CA C +N CA HA CB CA O C CG CB HB1 CB HB2 CB OE2 CD CG CD OE1 CD HG1 CG HG2 CG OE2 CZ HZ2 CZ HZ1 CZ HZ3 CZ [ impropers ] N -C CA HN C CA +N O CD CG OE1 OE2 [ cmap ] -C N CA C +N