! When using this topology, make sure you've included the required parameters ! (see http://swisssidechain.ch/MD/charmm.html) RESI 26P -1.00 ! 2-amino-6-oxopimelic acid GROUP ATOM N NH1 -0.4700 ATOM HN H 0.3100 ATOM CA CT1 0.0700 ATOM HA HB 0.0900 GROUP ATOM CB CT2 -0.1800 ATOM HB2 HA 0.0900 ATOM HB1 HA 0.0900 GROUP ATOM CG CT2 -0.1800 ATOM HG2 HA 0.0900 ATOM HG1 HA 0.0900 GROUP ATOM CD CT2 -0.1200 ATOM HD2 HA 0.0900 ATOM HD1 HA 0.0900 ATOM CE CC 0.36 ATOM OE O -0.5700 ATOM CZ CC 0.67 ATOM OZ1 OC -0.7600 ATOM OZ2 OC -0.7600 GROUP ATOM C C 0.5100 ATOM O O -0.5100 BOND CB CA N HN N CA C CA C +N CA HA DOUBLE O C BOND OZ1 CZ BOND OZ2 CZ BOND CD HD2 BOND CB HB2 BOND CG HG2 BOND CE CZ BOND CD CE BOND OE CE BOND CG CD BOND HD1 CD BOND CB CG BOND HG1 CG BOND HB1 CB IMPR N -C CA HN C CA +N O IMPR CE OE CZ CD IMPR CZ OZ1 OZ2 CE CMAP -C N CA C N CA C +N IC -C CA *N HN 1.3551 126.4900 180.0000 115.4200 0.9996 IC -C N CA C 1.3551 126.4900 180.0000 114.4400 1.5390 IC N CA C +N 1.4592 114.4400 180.0000 116.8400 1.3558 IC +N CA *C O 1.3558 116.8400 180.0000 122.5200 1.2297 IC CA C +N +CA 1.5390 116.8400 180.0000 126.7700 1.4613 IC N C *CA CB 1.4592 114.4400 123.2300 111.0900 1.5461 IC N C *CA HA 1.4592 114.4400 -120.4500 106.3900 1.0840 IC C CA CB CG 1.51 109.54 -180.00 109.55 1.53 IC C CA CB HB1 1.51 109.54 60.03 109.46 1.09 IC C CA CB HB2 1.51 109.54 -59.98 109.51 1.09 IC CA CB CG CD 1.53 109.55 -179.95 109.57 1.53 IC CA CB CG HG1 1.53 109.55 -59.92 109.45 1.09 IC CA CB CG HG2 1.53 109.55 60.06 109.44 1.09 IC CB CG CD CE 1.53 109.57 -179.96 109.57 1.51 IC CB CG CD HD1 1.53 109.57 59.97 109.45 1.09 IC CB CG CD HD2 1.53 109.57 -59.91 109.38 1.09 IC CG CD CE OE 1.53 109.57 -0.10 119.94 1.21 IC CG CD CE CZ 1.53 109.57 179.98 120.05 1.49 IC CD CE CZ OZ1 1.51 120.05 -0.03 120.01 1.21 IC CD CE CZ OZ2 1.51 120.05 180.00 120.07 1.35